Publications

(2022). Stochastic pursuit-evasion curves for foraging dynamics. Physica A: Statistical Mechanics and its Applications.

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(2021). Modeling Refugee Movement Based on a Continuum Mechanics Phase-Field Approach of Porous Media. SIAM Journal on Applied Mathematics.

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(2017). A hybrid fluctuating hydrodynamics and kinetic Monte Carlo method for modeling chemically-powered nanoscale motion. Journal of Mathematical Chemistry.

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(2017). The effect of thermal fluctuations on Holstein polaron dynamics in electric field. Physica B: Condensed Matter.

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(2017). Fluctuating hydrodynamics for ionic liquids. Physics Letters A.

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(2017). A two-level stochastic collocation method for semilinear elliptic equations with random coefficients. Journal of Computational and Applied Mathematics.

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(2017). A stochastic reaction-diffusion model for protein aggregation on DNA. International Journal of Modern Physics C.

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(2015). Allostery through protein-induced DNA bubbles. Scientific Reports.

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(2015). Modeling nanoscale hydrodynamics by smoothed dissipative particle dynamics. The Journal of Chemical Physics.

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(2014). Dynamic mesoscale model of dipolar fluids via fluctuating hydrodynamics. The Journal of Chemical Physics.

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(2012). Fluctuating hydrodynamics for multiscale modeling and simulation: Energy and heat transfer in molecular fluids. The Journal of Chemical Physics.

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(2011). Fluctuating hydrodynamics for multiscale simulation of inhomogeneous fluids: Mapping all-atom molecular dynamics to capillary waves. The Journal of Chemical Physics.

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(2010). Modelling the viscoelasticity and thermal fluctuations of fluids at the nanoscale. Molecular Simulation.

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(2009). Modeling the nanoscale viscoelasticity of fluids by bridging non-Markovian fluctuating hydrodynamics and molecular dynamics simulations. The Journal of Chemical Physics.

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(2009). Dendrimers as synthetic gene vectors: Cell membrane attachment. The Journal of Chemical Physics.

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(2009). Bridging fluctuating hydrodynamics and molecular dynamics simulations of fluids. The Journal of Chemical Physics.

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(2008). Pre-melting dynamics of DNA and its relation to specific functions. Journal of Physics: Condensed Matter.

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(2008). Thermally Induced Coherent Vibrations in DNA. SPIE.

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(2007). Opening rates of DNA hairpins: Experiment and model. Phys. Rev. E.

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(2006). Probing the Mechanical Unzipping of DNA. Phys. Rev. Lett..

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(2006). Sequencing DNA by Dynamic Force Spectroscopy:  Limitations and Prospects. Nano Letters.

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(2005). Bubble Nucleation and Cooperativity in DNA Melting. Phys. Rev. Lett..

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(2004). Computational investigation of intrinsic localization in crystalline Si. Phys. Rev. B.

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(2004). Temperature-Dependent Signatures of Coherent Vibrational Openings in DNA. Nano Letters.

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(2001). Polaronic electron transfer in $p̆beta$-sheet protein models. Journal of Physics: Condensed Matter.

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(2001). Multiquanta breather model for PtCl. Phys. Rev. B.

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(2000). Stationary and dynamical properties of polarons in the anharmonic Holstein model. Phys. Rev. B.

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(1999). Energy relaxation in discrete nonlinear lattices. Phys. Rev. E.

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