Bala Krishnamoorthy

Integer and Combinatorial Optimization $\bullet$ Geometry and Topology
Protein Structure and Folding $\bullet$ Bioinformatics and Computational Biology

1. Development of a four-body statistical pseudo-potential to discriminate native from non-native protein conformations (with A. Tropsha), Bioinformatics 19(12) (2003), pp. 1540-1548.

2. A topological characterization of protein structure (with Scott Provan and Alex Tropsha), book chapter in Data Mining in Biomedicine, published under the Biocomputing book series, Kluwer Academic Publishers (2006). Editors: Vladimir Boginski and Panos Pardalos.

3. Characterization of protein structure using geometry and topology (with Scott Provan and Alex Tropsha), refereed research poster in Intelligent Systems in Molecular Biology (2005).

4. Bounds on the size of branch-and-bound for integer knapsacks, (with Gábor Pataki), Operations Research Letters (In press).

5. Column basis reduction and Decomposable Knapsack Problems, (with Gábor Pataki), Mathematics of Operations Research (under review).

6. Four-body scoring function for mutagenesis (with Christopher Deutsch), in Bioinformatics, - under review.